Predict cross-technology harmonized rCLR scores

Predict cross-technology harmonized rCLR scores

Usage

predict_cross_tech_harmonized_rclr(
  fit,
  expr,
  meta,
  technology_col = fit$technology_col,
  min_anchors_present = 3L
)

Arguments

fit

Fit from `fit_cross_tech_harmonized_rclr()`.

expr

Numeric matrix, samples x features.

meta

Data frame aligned to `expr`; technology labels are validated but not used to select anchors.

technology_col

Column identifying technology class.

min_anchors_present

Minimum anchors required in `expr`.

Value

Numeric score vector with attribute `n_anchors_present`.

Details

Insufficient frozen anchor support raises a singlesample_input_error with code INSUFFICIENT_CROSS_TECH_ANCHORS, instead of an all-NA score vector.