Predict with a fitted block rCLR scorer

Predict with a fitted block rCLR scorer

Usage

predict_block_fe_rclr(
  fit,
  expr,
  meta,
  cohort_col = "cohort",
  block_col = fit$block_col
)

Arguments

fit

Optional object from `fit_block_fe_rclr()`.

expr

Numeric matrix, samples x features.

meta

Data frame aligned to `expr`.

cohort_col

Column in `meta` identifying cohorts; accepted for a common scorer signature but not used by this method.

block_col

Column in `meta` identifying provenance blocks.

Value

Numeric score vector.